STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX33DEAH-box helicase 33. (707 aa)    
Predicted Functional Partners:
RNASEL
Ribonuclease L.
    
 0.963
MAVS
Mitochondrial antiviral signaling protein.
    
 0.945
CDC40
Cell division cycle 40.
   
 0.943
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.935
SLU7
SLU7 homolog, splicing factor.
   
 0.935
UTP14A
UTP14A small subunit processome component.
   
 0.933
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.928
DDX49
DEAD-box helicase 49; Belongs to the DEAD box helicase family.
   
 0.924
YJU2
YJU2 splicing factor homolog.
    
 0.904
UTP3
UTP3 small subunit processome component.
   
 0.904
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.