STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP23Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family. (246 aa)    
Predicted Functional Partners:
OMA1
OMA1 zinc metallopeptidase.
    
 
 0.677
PMPCB
Peptidase, mitochondrial processing beta subunit; Belongs to the peptidase M16 family.
      
 0.659
MRPL20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
    0.658
PMPCA
Peptidase, mitochondrial processing alpha subunit; Belongs to the peptidase M16 family.
      
 0.639
MIPEP
Mitochondrial intermediate peptidase.
      
 0.637
ENSCCAP00000009536
Mitochondrial inner membrane protease subunit.
    
 
 0.630
IMMP1L
Mitochondrial inner membrane protease subunit.
    
 
 0.630
ENSCCAP00000035407
Uncharacterized protein.
    
 
 0.630
IMMP2L
Mitochondrial inner membrane protease subunit.
    
 
 0.611
PARL
Presenilin associated rhomboid like.
    
 
 0.605
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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