Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABRAXAS1 | BABAM1 | ENSCCAP00000004349 | ENSCCAP00000038445 | Abraxas 1, BRCA1 A complex subunit. | BRISC and BRCA1 A complex member 1. | 0.999 |
ABRAXAS1 | BABAM2 | ENSCCAP00000004349 | ENSCCAP00000037240 | Abraxas 1, BRCA1 A complex subunit. | BRISC and BRCA1 A complex member 2. | 0.994 |
ABRAXAS1 | BARD1 | ENSCCAP00000004349 | ENSCCAP00000006910 | Abraxas 1, BRCA1 A complex subunit. | BRCA1 associated RING domain 1. | 0.991 |
ABRAXAS1 | BRCA1 | ENSCCAP00000004349 | ENSCCAP00000017232 | Abraxas 1, BRCA1 A complex subunit. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.998 |
ABRAXAS1 | BRCC3 | ENSCCAP00000004349 | ENSCCAP00000031542 | Abraxas 1, BRCA1 A complex subunit. | BRCA1/BRCA2-containing complex subunit 3. | 0.995 |
ABRAXAS1 | ENSCCAP00000024430 | ENSCCAP00000004349 | ENSCCAP00000024430 | Abraxas 1, BRCA1 A complex subunit. | Uncharacterized protein. | 0.862 |
ABRAXAS1 | ENSCCAP00000032435 | ENSCCAP00000004349 | ENSCCAP00000032435 | Abraxas 1, BRCA1 A complex subunit. | Uncharacterized protein. | 0.578 |
BABAM1 | ABRAXAS1 | ENSCCAP00000038445 | ENSCCAP00000004349 | BRISC and BRCA1 A complex member 1. | Abraxas 1, BRCA1 A complex subunit. | 0.999 |
BABAM1 | BABAM2 | ENSCCAP00000038445 | ENSCCAP00000037240 | BRISC and BRCA1 A complex member 1. | BRISC and BRCA1 A complex member 2. | 0.999 |
BABAM1 | BARD1 | ENSCCAP00000038445 | ENSCCAP00000006910 | BRISC and BRCA1 A complex member 1. | BRCA1 associated RING domain 1. | 0.980 |
BABAM1 | BRCA1 | ENSCCAP00000038445 | ENSCCAP00000017232 | BRISC and BRCA1 A complex member 1. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.988 |
BABAM1 | BRCC3 | ENSCCAP00000038445 | ENSCCAP00000031542 | BRISC and BRCA1 A complex member 1. | BRCA1/BRCA2-containing complex subunit 3. | 0.996 |
BABAM1 | ENSCCAP00000024430 | ENSCCAP00000038445 | ENSCCAP00000024430 | BRISC and BRCA1 A complex member 1. | Uncharacterized protein. | 0.864 |
BABAM1 | ENSCCAP00000032435 | ENSCCAP00000038445 | ENSCCAP00000032435 | BRISC and BRCA1 A complex member 1. | Uncharacterized protein. | 0.554 |
BABAM2 | ABRAXAS1 | ENSCCAP00000037240 | ENSCCAP00000004349 | BRISC and BRCA1 A complex member 2. | Abraxas 1, BRCA1 A complex subunit. | 0.994 |
BABAM2 | BABAM1 | ENSCCAP00000037240 | ENSCCAP00000038445 | BRISC and BRCA1 A complex member 2. | BRISC and BRCA1 A complex member 1. | 0.999 |
BABAM2 | BARD1 | ENSCCAP00000037240 | ENSCCAP00000006910 | BRISC and BRCA1 A complex member 2. | BRCA1 associated RING domain 1. | 0.887 |
BABAM2 | BRCA1 | ENSCCAP00000037240 | ENSCCAP00000017232 | BRISC and BRCA1 A complex member 2. | Breast cancer type 1 susceptibility protein homolog; E3 ubiquitin-protein ligase that specifically mediates the formation of 'Lys-6'-linked polyubiquitin chains and plays a central role in DNA repair by facilitating cellular responses to DNA damage. It is unclear whether it also mediates the formation of other types of polyubiquitin chains. The E3 ubiquitin-protein ligase activity is required for its tumor suppressor function. The BRCA1-BARD1 heterodimer coordinates a diverse range of cellular pathways such as DNA damage repair, ubiquitination and transcriptional regulation to maintain [...] | 0.946 |
BABAM2 | BRCC3 | ENSCCAP00000037240 | ENSCCAP00000031542 | BRISC and BRCA1 A complex member 2. | BRCA1/BRCA2-containing complex subunit 3. | 0.995 |
BABAM2 | ENSCCAP00000024430 | ENSCCAP00000037240 | ENSCCAP00000024430 | BRISC and BRCA1 A complex member 2. | Uncharacterized protein. | 0.864 |
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