STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP6NLUSP6 N-terminal like. (851 aa)    
Predicted Functional Partners:
RABGEF1
Uncharacterized protein.
   
 0.913
RAB43
RAB43, member RAS oncogene family.
    
 0.740
RAB19
RAB19, member RAS oncogene family.
    
 0.701
GOLGA7B
Golgin A7 family member B.
      
 0.668
GOLGA7
Golgin A7.
      
 0.656
RAB5B
RAB5B, member RAS oncogene family.
    
 0.605
RAB5A
RAB5A, member RAS oncogene family.
    
 0.605
RAB17
RAB17, member RAS oncogene family.
    
 0.605
RAB5C
RAB5C, member RAS oncogene family.
    
 0.605
EPS8
Epidermal growth factor receptor pathway substrate 8.
   
 
 0.571
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.