Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CASK | EPS8L3 | ENSCCAP00000030293 | ENSCCAP00000027360 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | EPS8 like 3. | 0.754 |
CASK | LOC108293271 | ENSCCAP00000030293 | ENSCCAP00000000467 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Protein kinase domain-containing protein. | 0.982 |
CASK | MYO3A | ENSCCAP00000030293 | ENSCCAP00000033793 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.908 |
CASK | MYO3B | ENSCCAP00000030293 | ENSCCAP00000034023 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.908 |
CASK | USH1C | ENSCCAP00000030293 | ENSCCAP00000026074 | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | USH1 protein network component harmonin. | 0.508 |
COG4 | EPS8L3 | ENSCCAP00000037152 | ENSCCAP00000027360 | Component of oligomeric golgi complex 4. | EPS8 like 3. | 0.523 |
COG4 | MTSS2 | ENSCCAP00000037152 | ENSCCAP00000012936 | Component of oligomeric golgi complex 4. | MTSS I-BAR domain containing 2. | 0.447 |
COG4 | VAC14 | ENSCCAP00000037152 | ENSCCAP00000021953 | Component of oligomeric golgi complex 4. | VAC14 component of PIKFYVE complex. | 0.525 |
DSG4 | EPS8L3 | ENSCCAP00000010011 | ENSCCAP00000027360 | Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | EPS8 like 3. | 0.499 |
EPS8L3 | CASK | ENSCCAP00000027360 | ENSCCAP00000030293 | EPS8 like 3. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.754 |
EPS8L3 | COG4 | ENSCCAP00000027360 | ENSCCAP00000037152 | EPS8 like 3. | Component of oligomeric golgi complex 4. | 0.523 |
EPS8L3 | DSG4 | ENSCCAP00000027360 | ENSCCAP00000010011 | EPS8 like 3. | Desmoglein 4; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion. | 0.499 |
EPS8L3 | LOC108293271 | ENSCCAP00000027360 | ENSCCAP00000000467 | EPS8 like 3. | Protein kinase domain-containing protein. | 0.754 |
EPS8L3 | LPAR6 | ENSCCAP00000027360 | ENSCCAP00000002355 | EPS8 like 3. | Lysophosphatidic acid receptor 6; Belongs to the G-protein coupled receptor 1 family. | 0.522 |
EPS8L3 | MTSS2 | ENSCCAP00000027360 | ENSCCAP00000012936 | EPS8 like 3. | MTSS I-BAR domain containing 2. | 0.526 |
EPS8L3 | MYO3A | ENSCCAP00000027360 | ENSCCAP00000033793 | EPS8 like 3. | Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.533 |
EPS8L3 | MYO3B | ENSCCAP00000027360 | ENSCCAP00000034023 | EPS8 like 3. | Myosin IIIB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.533 |
EPS8L3 | USH1C | ENSCCAP00000027360 | ENSCCAP00000026074 | EPS8 like 3. | USH1 protein network component harmonin. | 0.486 |
EPS8L3 | VAC14 | ENSCCAP00000027360 | ENSCCAP00000021953 | EPS8 like 3. | VAC14 component of PIKFYVE complex. | 0.503 |
LOC108293271 | CASK | ENSCCAP00000000467 | ENSCCAP00000030293 | Protein kinase domain-containing protein. | Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family. | 0.982 |
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