STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NPNTNephronectin. (610 aa)    
Predicted Functional Partners:
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 0.908
FREM1
FRAS1 related extracellular matrix 1.
     
 0.903
FREM3
FRAS1 related extracellular matrix 3.
     
 0.895
FRAS1
Fraser extracellular matrix complex subunit 1.
     
 0.883
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
     
 0.832
FREM2
FRAS1 related extracellular matrix 2.
     
 0.769
ITGA2B
Integrin subunit alpha 2b; Belongs to the integrin alpha chain family.
   
 0.746
GSTCD
Glutathione S-transferase C-terminal domain containing.
     
 0.626
SH3RF2
SH3 domain containing ring finger 2.
      
 0.554
TRAPPC12
Trafficking protein particle complex 12.
      
 0.554
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.