STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC80Coiled-coil domain containing 80. (940 aa)    
Predicted Functional Partners:
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.829
LOC108288201
Ubiquitin-like domain-containing protein.
   
  0.829
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
     
 0.543
RANBP2
RAN binding protein 2.
   
 
  0.541
GLE1
GLE1 RNA export mediator.
    
 0.539
FREM1
FRAS1 related extracellular matrix 1.
    
 0.510
FREM3
FRAS1 related extracellular matrix 3.
    
 0.510
NID1
Nidogen 1.
  
 
 0.448
FRAS1
Fraser extracellular matrix complex subunit 1.
    
 0.440
COL5A2
Collagen type V alpha 2 chain.
   
 
 0.436
Your Current Organism:
Cebus capucinus
NCBI taxonomy Id: 9516
Other names: C. capucinus, white-faced capuchin, white-faced sapajou, white-throated capuchin
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.