Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANO5 | KATNBL1 | ENSCCAP00000031031 | ENSCCAP00000033031 | Anoctamin. | Katanin regulatory subunit B1 like 1. | 0.534 |
ANO5 | ZZEF1 | ENSCCAP00000031031 | ENSCCAP00000039753 | Anoctamin. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.478 |
CCDC68 | ZZEF1 | ENSCCAP00000000891 | ENSCCAP00000039753 | Coiled-coil domain containing 68. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.469 |
CKAP2L | ENSCCAP00000012294 | ENSCCAP00000000429 | ENSCCAP00000012294 | Cytoskeleton associated protein 2 like. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.659 |
CKAP2L | LOC108311445 | ENSCCAP00000000429 | ENSCCAP00000019433 | Cytoskeleton associated protein 2 like. | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.659 |
CKAP2L | ZZEF1 | ENSCCAP00000000429 | ENSCCAP00000039753 | Cytoskeleton associated protein 2 like. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.466 |
DPH3 | ZZEF1 | ENSCCAP00000034361 | ENSCCAP00000039753 | Diphthamide biosynthesis 3. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.485 |
ENSCCAP00000012294 | CKAP2L | ENSCCAP00000012294 | ENSCCAP00000000429 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Cytoskeleton associated protein 2 like. | 0.659 |
ENSCCAP00000012294 | ZZEF1 | ENSCCAP00000012294 | ENSCCAP00000039753 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.457 |
EP300 | ZZEF1 | ENSCCAP00000037833 | ENSCCAP00000039753 | E1A binding protein p300. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.463 |
KATNBL1 | ANO5 | ENSCCAP00000033031 | ENSCCAP00000031031 | Katanin regulatory subunit B1 like 1. | Anoctamin. | 0.534 |
KATNBL1 | ZZEF1 | ENSCCAP00000033031 | ENSCCAP00000039753 | Katanin regulatory subunit B1 like 1. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.590 |
LOC108311445 | CKAP2L | ENSCCAP00000019433 | ENSCCAP00000000429 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Cytoskeleton associated protein 2 like. | 0.659 |
LOC108311445 | ZZEF1 | ENSCCAP00000019433 | ENSCCAP00000039753 | Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.457 |
RANBP2 | ZZEF1 | ENSCCAP00000021131 | ENSCCAP00000039753 | RAN binding protein 2. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.614 |
VPS13D | ZZEF1 | ENSCCAP00000038628 | ENSCCAP00000039753 | Vacuolar protein sorting 13 homolog D. | Zinc finger ZZ-type and EF-hand domain containing 1. | 0.523 |
ZZEF1 | ANO5 | ENSCCAP00000039753 | ENSCCAP00000031031 | Zinc finger ZZ-type and EF-hand domain containing 1. | Anoctamin. | 0.478 |
ZZEF1 | CCDC68 | ENSCCAP00000039753 | ENSCCAP00000000891 | Zinc finger ZZ-type and EF-hand domain containing 1. | Coiled-coil domain containing 68. | 0.469 |
ZZEF1 | CKAP2L | ENSCCAP00000039753 | ENSCCAP00000000429 | Zinc finger ZZ-type and EF-hand domain containing 1. | Cytoskeleton associated protein 2 like. | 0.466 |
ZZEF1 | DPH3 | ENSCCAP00000039753 | ENSCCAP00000034361 | Zinc finger ZZ-type and EF-hand domain containing 1. | Diphthamide biosynthesis 3. | 0.485 |
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