Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS31721.1 | SFS35195.1 | SAMN05660874_00149 | SAMN05660874_00456 | Hsp70 protein; Belongs to the heat shock protein 70 family. | Trypsin. | 0.602 |
SFS31721.1 | SFS56914.1 | SAMN05660874_00149 | SAMN05660874_02015 | Hsp70 protein; Belongs to the heat shock protein 70 family. | Trypsin. | 0.659 |
SFS31721.1 | dnaK | SAMN05660874_00149 | SAMN05660874_03849 | Hsp70 protein; Belongs to the heat shock protein 70 family. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.803 |
SFS31721.1 | ndk | SAMN05660874_00149 | SAMN05660874_04395 | Hsp70 protein; Belongs to the heat shock protein 70 family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.720 |
SFS33378.1 | SFS35195.1 | SAMN05660874_00300 | SAMN05660874_00456 | Carboxypeptidase T. | Trypsin. | 0.751 |
SFS33378.1 | SFS56914.1 | SAMN05660874_00300 | SAMN05660874_02015 | Carboxypeptidase T. | Trypsin. | 0.784 |
SFS33378.1 | ndk | SAMN05660874_00300 | SAMN05660874_04395 | Carboxypeptidase T. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.462 |
SFS35182.1 | SFS35195.1 | SAMN05660874_00455 | SAMN05660874_00456 | ElaA protein. | Trypsin. | 0.596 |
SFS35195.1 | SFS31721.1 | SAMN05660874_00456 | SAMN05660874_00149 | Trypsin. | Hsp70 protein; Belongs to the heat shock protein 70 family. | 0.602 |
SFS35195.1 | SFS33378.1 | SAMN05660874_00456 | SAMN05660874_00300 | Trypsin. | Carboxypeptidase T. | 0.751 |
SFS35195.1 | SFS35182.1 | SAMN05660874_00456 | SAMN05660874_00455 | Trypsin. | ElaA protein. | 0.596 |
SFS35195.1 | SFS43685.1 | SAMN05660874_00456 | SAMN05660874_01106 | Trypsin. | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | 0.602 |
SFS35195.1 | SFS56914.1 | SAMN05660874_00456 | SAMN05660874_02015 | Trypsin. | Trypsin. | 0.741 |
SFS35195.1 | SFS93232.1 | SAMN05660874_00456 | SAMN05660874_04304 | Trypsin. | Serpin B; Belongs to the serpin family. | 0.683 |
SFS35195.1 | SFS96318.1 | SAMN05660874_00456 | SAMN05660874_04572 | Trypsin. | Zinc carboxypeptidase. | 0.655 |
SFS35195.1 | SFT03047.1 | SAMN05660874_00456 | SAMN05660874_05096 | Trypsin. | Hsp70 protein. | 0.602 |
SFS35195.1 | dnaK | SAMN05660874_00456 | SAMN05660874_03849 | Trypsin. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.602 |
SFS35195.1 | ndk | SAMN05660874_00456 | SAMN05660874_04395 | Trypsin. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.693 |
SFS43685.1 | SFS35195.1 | SAMN05660874_01106 | SAMN05660874_00456 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Trypsin. | 0.602 |
SFS43685.1 | SFS56914.1 | SAMN05660874_01106 | SAMN05660874_02015 | Chaperone protein HscA; Belongs to the heat shock protein 70 family. | Trypsin. | 0.693 |
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