Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS35529.1 | SFS35546.1 | SAMN05660874_00481 | SAMN05660874_00482 | Cell division protein FtsI/penicillin-binding protein 2. | Hypothetical protein. | 0.694 |
SFS35529.1 | ispG | SAMN05660874_00481 | SAMN05660874_00483 | Cell division protein FtsI/penicillin-binding protein 2. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.538 |
SFS35546.1 | SFS35529.1 | SAMN05660874_00482 | SAMN05660874_00481 | Hypothetical protein. | Cell division protein FtsI/penicillin-binding protein 2. | 0.694 |
SFS35546.1 | SFS37531.1 | SAMN05660874_00482 | SAMN05660874_00628 | Hypothetical protein. | Cobalamin-independent synthase, Catalytic domain. | 0.664 |
SFS35546.1 | SFS50720.1 | SAMN05660874_00482 | SAMN05660874_01371 | Hypothetical protein. | Lsr2 protein. | 0.547 |
SFS35546.1 | SFS54014.1 | SAMN05660874_00482 | SAMN05660874_01641 | Hypothetical protein. | Regulator of protease activity HflC, stomatin/prohibitin superfamily. | 0.536 |
SFS35546.1 | SFS57093.1 | SAMN05660874_00482 | SAMN05660874_02043 | Hypothetical protein. | Lsr2 protein. | 0.533 |
SFS35546.1 | SFS67103.1 | SAMN05660874_00482 | SAMN05660874_02531 | Hypothetical protein. | Protein of unknown function. | 0.567 |
SFS35546.1 | SFS80324.1 | SAMN05660874_00482 | SAMN05660874_03413 | Hypothetical protein. | SPFH domain, Band 7 family protein. | 0.536 |
SFS35546.1 | SFS92779.1 | SAMN05660874_00482 | SAMN05660874_04252 | Hypothetical protein. | Protein of unknown function. | 0.739 |
SFS35546.1 | arc | SAMN05660874_00482 | SAMN05660874_02750 | Hypothetical protein. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.719 |
SFS35546.1 | ispG | SAMN05660874_00482 | SAMN05660874_00483 | Hypothetical protein. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.666 |
SFS37531.1 | SFS35546.1 | SAMN05660874_00628 | SAMN05660874_00482 | Cobalamin-independent synthase, Catalytic domain. | Hypothetical protein. | 0.664 |
SFS37531.1 | SFS50720.1 | SAMN05660874_00628 | SAMN05660874_01371 | Cobalamin-independent synthase, Catalytic domain. | Lsr2 protein. | 0.568 |
SFS37531.1 | SFS57093.1 | SAMN05660874_00628 | SAMN05660874_02043 | Cobalamin-independent synthase, Catalytic domain. | Lsr2 protein. | 0.617 |
SFS37531.1 | SFS92779.1 | SAMN05660874_00628 | SAMN05660874_04252 | Cobalamin-independent synthase, Catalytic domain. | Protein of unknown function. | 0.640 |
SFS50720.1 | SFS35546.1 | SAMN05660874_01371 | SAMN05660874_00482 | Lsr2 protein. | Hypothetical protein. | 0.547 |
SFS50720.1 | SFS37531.1 | SAMN05660874_01371 | SAMN05660874_00628 | Lsr2 protein. | Cobalamin-independent synthase, Catalytic domain. | 0.568 |
SFS50720.1 | SFS67103.1 | SAMN05660874_01371 | SAMN05660874_02531 | Lsr2 protein. | Protein of unknown function. | 0.553 |
SFS50720.1 | SFS92779.1 | SAMN05660874_01371 | SAMN05660874_04252 | Lsr2 protein. | Protein of unknown function. | 0.592 |
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