STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS35660.1Manganese transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family. (308 aa)    
Predicted Functional Partners:
SFS35690.1
Manganese transport system permease protein.
 
 0.996
SFS35674.1
Manganese transport system ATP-binding protein.
 
 
 0.994
SFS74342.1
Manganese/iron transport system permease protein.
 
 0.973
SFS74330.1
Zinc/manganese transport system ATP-binding protein.
 
 
 0.953
SFS56825.1
Zinc/manganese transport system permease protein.
 
 
 0.938
SFS56834.1
Zinc/manganese transport system ATP-binding protein.
  
 
 0.862
SFS35697.1
Iron (metal) dependent repressor, DtxR family.
  
 
 0.791
SFS40033.1
Hypothetical protein.
  
 
 0.772
SFS55449.1
GTPase, G3E family.
  
  
 0.670
rpmB-2
LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.644
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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