STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS38396.1Hypothetical protein. (528 aa)    
Predicted Functional Partners:
SFS54718.1
Hypothetical protein.
  
     0.755
SFS33572.1
Protein of unknown function.
  
     0.751
SFS53884.1
Putative zinc-finger.
  
    0.748
SFS85215.1
Hypothetical protein.
  
    0.728
SFS85972.1
Hypothetical protein.
  
     0.706
SFS86739.1
Hypothetical protein.
  
     0.688
SFT06924.1
PPE family protein.
  
  
  0.684
SFS38377.1
SPW repeat-containing protein.
 
     0.679
SFS54517.1
Hypothetical protein.
  
     0.674
SFT07669.1
Component of the Tol biopolymer transport system.
  
 
 0.672
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.