Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS32568.1 | SFS35366.1 | SAMN05660874_00229 | SAMN05660874_00470 | Dihydrolipoamide dehydrogenase. | Mycothione reductase. | 0.690 |
SFS32568.1 | SFS39741.1 | SAMN05660874_00229 | SAMN05660874_00799 | Dihydrolipoamide dehydrogenase. | 2-oxoglutarate dehydrogenase E1 component. | 0.999 |
SFS32568.1 | SFS65935.1 | SAMN05660874_00229 | SAMN05660874_02392 | Dihydrolipoamide dehydrogenase. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.916 |
SFS32568.1 | SFS68064.1 | SAMN05660874_00229 | SAMN05660874_02672 | Dihydrolipoamide dehydrogenase. | Dihydrolipoamide dehydrogenase. | 0.915 |
SFS32568.1 | SFT01083.1 | SAMN05660874_00229 | SAMN05660874_04916 | Dihydrolipoamide dehydrogenase. | 2-oxoisovalerate dehydrogenase E1 component. | 0.992 |
SFS32568.1 | SFT05582.1 | SAMN05660874_00229 | SAMN05660874_05337 | Dihydrolipoamide dehydrogenase. | Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component. | 0.695 |
SFS32568.1 | sucC | SAMN05660874_00229 | SAMN05660874_01010 | Dihydrolipoamide dehydrogenase. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.526 |
SFS32568.1 | sucD | SAMN05660874_00229 | SAMN05660874_01009 | Dihydrolipoamide dehydrogenase. | succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit. | 0.441 |
SFS35366.1 | SFS32568.1 | SAMN05660874_00470 | SAMN05660874_00229 | Mycothione reductase. | Dihydrolipoamide dehydrogenase. | 0.690 |
SFS35366.1 | SFS39741.1 | SAMN05660874_00470 | SAMN05660874_00799 | Mycothione reductase. | 2-oxoglutarate dehydrogenase E1 component. | 0.998 |
SFS35366.1 | SFS65935.1 | SAMN05660874_00470 | SAMN05660874_02392 | Mycothione reductase. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.916 |
SFS35366.1 | SFS68064.1 | SAMN05660874_00470 | SAMN05660874_02672 | Mycothione reductase. | Dihydrolipoamide dehydrogenase. | 0.680 |
SFS35366.1 | SFT01083.1 | SAMN05660874_00470 | SAMN05660874_04916 | Mycothione reductase. | 2-oxoisovalerate dehydrogenase E1 component. | 0.988 |
SFS35366.1 | sucC | SAMN05660874_00470 | SAMN05660874_01010 | Mycothione reductase. | succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit. | 0.431 |
SFS39741.1 | SFS32568.1 | SAMN05660874_00799 | SAMN05660874_00229 | 2-oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide dehydrogenase. | 0.999 |
SFS39741.1 | SFS35366.1 | SAMN05660874_00799 | SAMN05660874_00470 | 2-oxoglutarate dehydrogenase E1 component. | Mycothione reductase. | 0.998 |
SFS39741.1 | SFS40988.1 | SAMN05660874_00799 | SAMN05660874_00904 | 2-oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide dehydrogenase. | 0.998 |
SFS39741.1 | SFS65935.1 | SAMN05660874_00799 | SAMN05660874_02392 | 2-oxoglutarate dehydrogenase E1 component. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.997 |
SFS39741.1 | SFS66401.1 | SAMN05660874_00799 | SAMN05660874_02447 | 2-oxoglutarate dehydrogenase E1 component. | FHA domain-containing protein. | 0.995 |
SFS39741.1 | SFS68064.1 | SAMN05660874_00799 | SAMN05660874_02672 | 2-oxoglutarate dehydrogenase E1 component. | Dihydrolipoamide dehydrogenase. | 0.999 |
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