Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS32290.1 | SFS39777.1 | SAMN05660874_00203 | SAMN05660874_00802 | Dimethylglycine oxidase; Belongs to the GcvT family. | Methyltransferase domain-containing protein. | 0.631 |
SFS32290.1 | SFS42490.1 | SAMN05660874_00203 | SAMN05660874_01015 | Dimethylglycine oxidase; Belongs to the GcvT family. | Phosphopantetheine attachment site. | 0.593 |
SFS32290.1 | SFS65456.1 | SAMN05660874_00203 | SAMN05660874_02334 | Dimethylglycine oxidase; Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.488 |
SFS32290.1 | SFS65519.1 | SAMN05660874_00203 | SAMN05660874_02342 | Dimethylglycine oxidase; Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.796 |
SFS32290.1 | SFS89588.1 | SAMN05660874_00203 | SAMN05660874_04018 | Dimethylglycine oxidase; Belongs to the GcvT family. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.992 |
SFS32290.1 | SFS90387.1 | SAMN05660874_00203 | SAMN05660874_04094 | Dimethylglycine oxidase; Belongs to the GcvT family. | Acyl transferase domain-containing protein. | 0.807 |
SFS32290.1 | gcvP | SAMN05660874_00203 | SAMN05660874_04958 | Dimethylglycine oxidase; Belongs to the GcvT family. | Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.997 |
SFS39777.1 | SFS32290.1 | SAMN05660874_00802 | SAMN05660874_00203 | Methyltransferase domain-containing protein. | Dimethylglycine oxidase; Belongs to the GcvT family. | 0.631 |
SFS39777.1 | SFS42490.1 | SAMN05660874_00802 | SAMN05660874_01015 | Methyltransferase domain-containing protein. | Phosphopantetheine attachment site. | 0.604 |
SFS39777.1 | SFS65456.1 | SAMN05660874_00802 | SAMN05660874_02334 | Methyltransferase domain-containing protein. | Acyl transferase domain-containing protein. | 0.589 |
SFS39777.1 | SFS65519.1 | SAMN05660874_00802 | SAMN05660874_02342 | Methyltransferase domain-containing protein. | Acyl transferase domain-containing protein. | 0.644 |
SFS39777.1 | SFS89588.1 | SAMN05660874_00802 | SAMN05660874_04018 | Methyltransferase domain-containing protein. | Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family. | 0.631 |
SFS39777.1 | SFS90053.1 | SAMN05660874_00802 | SAMN05660874_04060 | Methyltransferase domain-containing protein. | Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D. | 0.655 |
SFS39777.1 | SFS90387.1 | SAMN05660874_00802 | SAMN05660874_04094 | Methyltransferase domain-containing protein. | Acyl transferase domain-containing protein. | 0.769 |
SFS39777.1 | SFT09094.1 | SAMN05660874_00802 | SAMN05660874_05629 | Methyltransferase domain-containing protein. | Nonribosomal peptide synthetase DhbF. | 0.643 |
SFS39777.1 | gcvP | SAMN05660874_00802 | SAMN05660874_04958 | Methyltransferase domain-containing protein. | Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.603 |
SFS39777.1 | metXA | SAMN05660874_00802 | SAMN05660874_05225 | Methyltransferase domain-containing protein. | Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine. | 0.849 |
SFS42490.1 | SFS32290.1 | SAMN05660874_01015 | SAMN05660874_00203 | Phosphopantetheine attachment site. | Dimethylglycine oxidase; Belongs to the GcvT family. | 0.593 |
SFS42490.1 | SFS39777.1 | SAMN05660874_01015 | SAMN05660874_00802 | Phosphopantetheine attachment site. | Methyltransferase domain-containing protein. | 0.604 |
SFS42490.1 | SFS65456.1 | SAMN05660874_01015 | SAMN05660874_02334 | Phosphopantetheine attachment site. | Acyl transferase domain-containing protein. | 0.999 |
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