STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS51644.1Signal transduction histidine kinase. (448 aa)    
Predicted Functional Partners:
SFS51633.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.977
SFS51655.1
Hypothetical protein.
 
     0.912
SFS77830.1
Signal transduction histidine kinase.
 
 
0.902
SFS72133.1
PAS domain-containing protein.
 
 
 0.878
SFS54218.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.873
SFS71189.1
Diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.872
SFS89143.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
  0.870
SFS55426.1
Two-component system, OmpR family, response regulator MprA.
 
  0.864
SFS46056.1
Two-component system, OmpR family, response regulator RegX3.
 
  0.863
SFS36439.1
Two-component system, OmpR family, response regulator.
 
  0.859
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.