Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS54634.1 | SFS54648.1 | SAMN05660874_01702 | SAMN05660874_01703 | Protein of unknown function. | IMP dehydrogenase. | 0.627 |
SFS54634.1 | fumC | SAMN05660874_01702 | SAMN05660874_01700 | Protein of unknown function. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.609 |
SFS54634.1 | lig | SAMN05660874_01702 | SAMN05660874_01701 | Protein of unknown function. | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.754 |
SFS54648.1 | SFS54634.1 | SAMN05660874_01703 | SAMN05660874_01702 | IMP dehydrogenase. | Protein of unknown function. | 0.627 |
SFS54648.1 | fumC | SAMN05660874_01703 | SAMN05660874_01700 | IMP dehydrogenase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.559 |
SFS54648.1 | lig | SAMN05660874_01703 | SAMN05660874_01701 | IMP dehydrogenase. | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.663 |
fumC | SFS54634.1 | SAMN05660874_01700 | SAMN05660874_01702 | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | Protein of unknown function. | 0.609 |
fumC | SFS54648.1 | SAMN05660874_01700 | SAMN05660874_01703 | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | IMP dehydrogenase. | 0.559 |
fumC | lig | SAMN05660874_01700 | SAMN05660874_01701 | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.680 |
lig | SFS54634.1 | SAMN05660874_01701 | SAMN05660874_01702 | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | Protein of unknown function. | 0.754 |
lig | SFS54648.1 | SAMN05660874_01701 | SAMN05660874_01703 | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | IMP dehydrogenase. | 0.663 |
lig | fumC | SAMN05660874_01701 | SAMN05660874_01700 | DNA ligase-1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.680 |