Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS38195.1 | SFS56097.1 | SAMN05660874_00674 | SAMN05660874_01892 | Mannose-6-phosphate isomerase. | Fructokinase. | 0.823 |
SFS38195.1 | SFS56757.1 | SAMN05660874_00674 | SAMN05660874_01989 | Mannose-6-phosphate isomerase. | Glutamine--fructose-6-phosphate transaminase. | 0.800 |
SFS38195.1 | SFS70331.1 | SAMN05660874_00674 | SAMN05660874_02772 | Mannose-6-phosphate isomerase. | PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.714 |
SFS38195.1 | SFS79736.1 | SAMN05660874_00674 | SAMN05660874_03362 | Mannose-6-phosphate isomerase. | Fructuronate reductase; Belongs to the mannitol dehydrogenase family. | 0.782 |
SFS38195.1 | SFT07289.1 | SAMN05660874_00674 | SAMN05660874_05492 | Mannose-6-phosphate isomerase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.923 |
SFS38195.1 | xylA | SAMN05660874_00674 | SAMN05660874_05051 | Mannose-6-phosphate isomerase. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.444 |
SFS40236.1 | SFS56097.1 | SAMN05660874_00841 | SAMN05660874_01892 | Mannose-6-phosphate isomerase, type 1. | Fructokinase. | 0.823 |
SFS40236.1 | SFS56757.1 | SAMN05660874_00841 | SAMN05660874_01989 | Mannose-6-phosphate isomerase, type 1. | Glutamine--fructose-6-phosphate transaminase. | 0.828 |
SFS40236.1 | SFS70331.1 | SAMN05660874_00841 | SAMN05660874_02772 | Mannose-6-phosphate isomerase, type 1. | PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.714 |
SFS40236.1 | SFS79736.1 | SAMN05660874_00841 | SAMN05660874_03362 | Mannose-6-phosphate isomerase, type 1. | Fructuronate reductase; Belongs to the mannitol dehydrogenase family. | 0.787 |
SFS40236.1 | SFT07289.1 | SAMN05660874_00841 | SAMN05660874_05492 | Mannose-6-phosphate isomerase, type 1. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.923 |
SFS40236.1 | xylA | SAMN05660874_00841 | SAMN05660874_05051 | Mannose-6-phosphate isomerase, type 1. | Xylose isomerase; Belongs to the xylose isomerase family. | 0.444 |
SFS56097.1 | SFS38195.1 | SAMN05660874_01892 | SAMN05660874_00674 | Fructokinase. | Mannose-6-phosphate isomerase. | 0.823 |
SFS56097.1 | SFS40236.1 | SAMN05660874_01892 | SAMN05660874_00841 | Fructokinase. | Mannose-6-phosphate isomerase, type 1. | 0.823 |
SFS56097.1 | SFS56757.1 | SAMN05660874_01892 | SAMN05660874_01989 | Fructokinase. | Glutamine--fructose-6-phosphate transaminase. | 0.837 |
SFS56097.1 | SFS67886.1 | SAMN05660874_01892 | SAMN05660874_02642 | Fructokinase. | Alpha-glucosidase. | 0.866 |
SFS56097.1 | SFS70310.1 | SAMN05660874_01892 | SAMN05660874_02771 | Fructokinase. | PTS system D-fructose-specific IIA component (F1P-forming), Frc family. | 0.825 |
SFS56097.1 | SFS70331.1 | SAMN05660874_01892 | SAMN05660874_02772 | Fructokinase. | PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family. | 0.867 |
SFS56097.1 | SFS74253.1 | SAMN05660874_01892 | SAMN05660874_03060 | Fructokinase. | 5-deoxyglucuronate isomerase. | 0.843 |
SFS56097.1 | SFS79736.1 | SAMN05660874_01892 | SAMN05660874_03362 | Fructokinase. | Fructuronate reductase; Belongs to the mannitol dehydrogenase family. | 0.866 |
page 1 of 3