Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS52017.1 | SFS57254.1 | SAMN05660874_01470 | SAMN05660874_02070 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.404 |
SFS52017.1 | SFS82667.1 | SAMN05660874_01470 | SAMN05660874_03616 | Hypothetical protein. | Protein of unknown function. | 0.419 |
SFS57248.1 | SFS57254.1 | SAMN05660874_02069 | SAMN05660874_02070 | Reductase C-terminal. | Transcriptional regulator, TetR family. | 0.742 |
SFS57248.1 | SFS57264.1 | SAMN05660874_02069 | SAMN05660874_02071 | Reductase C-terminal. | Threonine dehydratase. | 0.707 |
SFS57248.1 | SFS57268.1 | SAMN05660874_02069 | SAMN05660874_02072 | Reductase C-terminal. | Helix-turn-helix domain-containing protein. | 0.435 |
SFS57254.1 | SFS52017.1 | SAMN05660874_02070 | SAMN05660874_01470 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.404 |
SFS57254.1 | SFS57248.1 | SAMN05660874_02070 | SAMN05660874_02069 | Transcriptional regulator, TetR family. | Reductase C-terminal. | 0.742 |
SFS57254.1 | SFS57264.1 | SAMN05660874_02070 | SAMN05660874_02071 | Transcriptional regulator, TetR family. | Threonine dehydratase. | 0.741 |
SFS57254.1 | SFS57268.1 | SAMN05660874_02070 | SAMN05660874_02072 | Transcriptional regulator, TetR family. | Helix-turn-helix domain-containing protein. | 0.454 |
SFS57254.1 | SFS82621.1 | SAMN05660874_02070 | SAMN05660874_03612 | Transcriptional regulator, TetR family. | Sugar lactone lactonase YvrE. | 0.529 |
SFS57254.1 | SFS82667.1 | SAMN05660874_02070 | SAMN05660874_03616 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.425 |
SFS57254.1 | SFS99406.1 | SAMN05660874_02070 | SAMN05660874_04804 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.412 |
SFS57264.1 | SFS57248.1 | SAMN05660874_02071 | SAMN05660874_02069 | Threonine dehydratase. | Reductase C-terminal. | 0.707 |
SFS57264.1 | SFS57254.1 | SAMN05660874_02071 | SAMN05660874_02070 | Threonine dehydratase. | Transcriptional regulator, TetR family. | 0.741 |
SFS57264.1 | SFS57268.1 | SAMN05660874_02071 | SAMN05660874_02072 | Threonine dehydratase. | Helix-turn-helix domain-containing protein. | 0.470 |
SFS57268.1 | SFS57248.1 | SAMN05660874_02072 | SAMN05660874_02069 | Helix-turn-helix domain-containing protein. | Reductase C-terminal. | 0.435 |
SFS57268.1 | SFS57254.1 | SAMN05660874_02072 | SAMN05660874_02070 | Helix-turn-helix domain-containing protein. | Transcriptional regulator, TetR family. | 0.454 |
SFS57268.1 | SFS57264.1 | SAMN05660874_02072 | SAMN05660874_02071 | Helix-turn-helix domain-containing protein. | Threonine dehydratase. | 0.470 |
SFS82621.1 | SFS57254.1 | SAMN05660874_03612 | SAMN05660874_02070 | Sugar lactone lactonase YvrE. | Transcriptional regulator, TetR family. | 0.529 |
SFS82667.1 | SFS52017.1 | SAMN05660874_03616 | SAMN05660874_01470 | Protein of unknown function. | Hypothetical protein. | 0.419 |
page 1 of 2