STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS64502.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
SFS35600.1
Protein of unknown function.
  
     0.764
SFS85272.1
SdpI/YhfL protein family protein.
  
     0.758
SFS42924.1
Anti-sigma-D factor RsdA to sigma factor binding region.
  
     0.757
SFS86917.1
Hypothetical protein.
  
     0.755
SFS84220.1
Protein of unknown function.
  
     0.738
SFS84469.1
RecB family nuclease, putative, TM0106 family.
  
     0.720
SFS94040.1
Protein of unknown function.
  
     0.719
SFS34814.1
Hypothetical protein.
  
     0.709
SFS79963.1
Hypothetical protein.
 
     0.708
SFS87478.1
Protein of unknown function.
  
     0.701
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.