STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS65877.1Predicted arabinose efflux permease, MFS family. (392 aa)    
Predicted Functional Partners:
SFS65887.1
Predicted arabinose efflux permease, MFS family.
       0.773
SFS73368.1
Ribosomal protein S18 acetylase RimI.
  
     0.622
SFS65896.1
Hypothetical protein.
       0.620
SFS37379.1
Transcriptional regulator, TetR family.
  
     0.567
SFS74284.1
2-polyprenyl-6-methoxyphenol hydroxylase.
  
     0.519
SFS99096.1
Protein of unknown function.
  
     0.491
SFS71315.1
Predicted ester cyclase.
  
     0.484
SFT00383.1
SRSO17 transposase.
  
    0.471
SFS46526.1
PBP superfamily domain-containing protein.
  
     0.468
SFS65852.1
Ribonucleoside-diphosphate reductase beta chain.
  
     0.436
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.