STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS67653.1Hypothetical protein. (121 aa)    
Predicted Functional Partners:
SFS35697.1
Iron (metal) dependent repressor, DtxR family.
   
    0.723
SFS67656.1
Serine/threonine protein kinase.
     
 0.651
SFS80123.1
NAD-dependent deacetylase.
   
    0.632
SFS67712.1
Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
      
 0.587
SFS33729.1
YggT family protein.
  
     0.539
SFS67077.1
Protein of unknown function.
  
     0.507
SFS39042.1
Transcriptional attenuator, LytR family.
   
    0.485
SFS66375.1
Transcriptional attenuator, LytR family.
   
    0.485
SFS66515.1
Transcriptional attenuator, LytR family.
   
    0.485
SFS80513.1
Transcriptional attenuator, LytR family.
   
    0.485
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.