STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS68057.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.693
SFS33378.1
Carboxypeptidase T.
   
 0.655
SFS96318.1
Zinc carboxypeptidase.
   
 0.655
SFS71882.1
Mce-associated membrane protein.
  
 
 0.621
SFS93232.1
Serpin B; Belongs to the serpin family.
   
 0.606
SFS31721.1
Hsp70 protein; Belongs to the heat shock protein 70 family.
    
 
 0.602
SFS43685.1
Chaperone protein HscA; Belongs to the heat shock protein 70 family.
    
 
 0.602
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.602
SFT03047.1
Hsp70 protein.
    
 
 0.602
SFS68070.1
2-oxoglutarate dehydrogenase E2 component.
   
   0.601
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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