STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS69375.1Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. (432 aa)    
Predicted Functional Partners:
SFS69390.1
Nitrogen fixation protein NifU.
 
 0.997
SFS69347.1
Iron-regulated ABC transporter ATPase subunit SufC.
 
  
 0.986
SFS69322.1
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.967
SFS69334.1
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.967
SFS69403.1
Metal-sulfur cluster biosynthetic enzyme.
 
  
 0.912
SFS85143.1
Thioredoxin reductase (NADPH).
 
 
  0.773
gcvP
Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.747
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
   
 0.742
SFS54776.1
Cystathionine gamma-lyase.
     
 0.734
SFS37003.1
Cystathionine gamma-lyase.
     
 0.732
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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