Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS65519.1 | SFS65935.1 | SAMN05660874_02342 | SAMN05660874_02392 | Acyl transferase domain-containing protein. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.989 |
SFS65519.1 | SFS69530.1 | SAMN05660874_02342 | SAMN05660874_02717 | Acyl transferase domain-containing protein. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.844 |
SFS65519.1 | SFS77830.1 | SAMN05660874_02342 | SAMN05660874_03206 | Acyl transferase domain-containing protein. | Signal transduction histidine kinase. | 0.951 |
SFS65519.1 | SFS80036.1 | SAMN05660874_02342 | SAMN05660874_03390 | Acyl transferase domain-containing protein. | Aconitase. | 0.824 |
SFS65519.1 | SFT01314.1 | SAMN05660874_02342 | SAMN05660874_04942 | Acyl transferase domain-containing protein. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.981 |
SFS65519.1 | rplM | SAMN05660874_02342 | SAMN05660874_01103 | Acyl transferase domain-containing protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.991 |
SFS65519.1 | rplQ | SAMN05660874_02342 | SAMN05660874_01123 | Acyl transferase domain-containing protein. | LSU ribosomal protein L17P. | 0.983 |
SFS65519.1 | rpsI | SAMN05660874_02342 | SAMN05660874_01102 | Acyl transferase domain-containing protein. | Small subunit ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.757 |
SFS65519.1 | rpsO | SAMN05660874_02342 | SAMN05660874_00410 | Acyl transferase domain-containing protein. | Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.929 |
SFS65519.1 | rpsP | SAMN05660874_02342 | SAMN05660874_00517 | Acyl transferase domain-containing protein. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.848 |
SFS65935.1 | SFS65519.1 | SAMN05660874_02392 | SAMN05660874_02342 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | Acyl transferase domain-containing protein. | 0.989 |
SFS65935.1 | SFS69530.1 | SAMN05660874_02392 | SAMN05660874_02717 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.773 |
SFS65935.1 | SFS77830.1 | SAMN05660874_02392 | SAMN05660874_03206 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | Signal transduction histidine kinase. | 0.836 |
SFS65935.1 | SFS80036.1 | SAMN05660874_02392 | SAMN05660874_03390 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | Aconitase. | 0.677 |
SFS65935.1 | SFT01314.1 | SAMN05660874_02392 | SAMN05660874_04942 | Acetyl/propionyl-CoA carboxylase, alpha subunit. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.999 |
SFS69530.1 | SFS65519.1 | SAMN05660874_02717 | SAMN05660874_02342 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acyl transferase domain-containing protein. | 0.844 |
SFS69530.1 | SFS65935.1 | SAMN05660874_02717 | SAMN05660874_02392 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Acetyl/propionyl-CoA carboxylase, alpha subunit. | 0.773 |
SFS69530.1 | SFS77830.1 | SAMN05660874_02717 | SAMN05660874_03206 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Signal transduction histidine kinase. | 0.936 |
SFS69530.1 | SFS80036.1 | SAMN05660874_02717 | SAMN05660874_03390 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Aconitase. | 0.684 |
SFS69530.1 | SFT01314.1 | SAMN05660874_02717 | SAMN05660874_04942 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | acetyl-CoA carboxylase carboxyl transferase subunit beta. | 0.696 |
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