Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS40256.1 | SFS69687.1 | SAMN05660874_00842 | SAMN05660874_02728 | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | Conserved hypothetical protein. | 0.419 |
SFS54145.1 | SFS69687.1 | SAMN05660874_01654 | SAMN05660874_02728 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | Conserved hypothetical protein. | 0.645 |
SFS54145.1 | SFS69703.1 | SAMN05660874_01654 | SAMN05660874_02729 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | Conserved hypothetical protein. | 0.710 |
SFS54145.1 | SFS81543.1 | SAMN05660874_01654 | SAMN05660874_03514 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | Probable phosphomutase, MSMEG_4193 family. | 0.403 |
SFS54145.1 | mca | SAMN05660874_01654 | SAMN05660874_01711 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.407 |
SFS54145.1 | mshC | SAMN05660874_01654 | SAMN05660874_02736 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | cysteinyl-tRNA synthetase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.833 |
SFS54145.1 | mshD | SAMN05660874_01654 | SAMN05660874_03929 | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.847 |
SFS69647.1 | SFS69677.1 | SAMN05660874_02725 | SAMN05660874_02727 | mRNA interferase MazF. | Muramoyltetrapeptide carboxypeptidase. | 0.618 |
SFS69647.1 | SFS69687.1 | SAMN05660874_02725 | SAMN05660874_02728 | mRNA interferase MazF. | Conserved hypothetical protein. | 0.401 |
SFS69647.1 | SFS69703.1 | SAMN05660874_02725 | SAMN05660874_02729 | mRNA interferase MazF. | Conserved hypothetical protein. | 0.401 |
SFS69677.1 | SFS69647.1 | SAMN05660874_02727 | SAMN05660874_02725 | Muramoyltetrapeptide carboxypeptidase. | mRNA interferase MazF. | 0.618 |
SFS69677.1 | SFS69687.1 | SAMN05660874_02727 | SAMN05660874_02728 | Muramoyltetrapeptide carboxypeptidase. | Conserved hypothetical protein. | 0.547 |
SFS69677.1 | SFS69703.1 | SAMN05660874_02727 | SAMN05660874_02729 | Muramoyltetrapeptide carboxypeptidase. | Conserved hypothetical protein. | 0.546 |
SFS69687.1 | SFS40256.1 | SAMN05660874_02728 | SAMN05660874_00842 | Conserved hypothetical protein. | Phospho-glucose isomerase C-terminal SIS domain-containing protein. | 0.419 |
SFS69687.1 | SFS54145.1 | SAMN05660874_02728 | SAMN05660874_01654 | Conserved hypothetical protein. | N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Belongs to the MshB deacetylase family. | 0.645 |
SFS69687.1 | SFS69647.1 | SAMN05660874_02728 | SAMN05660874_02725 | Conserved hypothetical protein. | mRNA interferase MazF. | 0.401 |
SFS69687.1 | SFS69677.1 | SAMN05660874_02728 | SAMN05660874_02727 | Conserved hypothetical protein. | Muramoyltetrapeptide carboxypeptidase. | 0.547 |
SFS69687.1 | SFS69703.1 | SAMN05660874_02728 | SAMN05660874_02729 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.969 |
SFS69687.1 | SFS81543.1 | SAMN05660874_02728 | SAMN05660874_03514 | Conserved hypothetical protein. | Probable phosphomutase, MSMEG_4193 family. | 0.752 |
SFS69687.1 | mca | SAMN05660874_02728 | SAMN05660874_01711 | Conserved hypothetical protein. | Mycothiol S-conjugate amidase; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.426 |
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