STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS79556.1Protocatechuate 4,5-dioxygenase alpha subunit. (114 aa)    
Predicted Functional Partners:
SFS79568.1
Protocatechuate 4,5-dioxygenase, beta chain.
 
  
  0.991
SFS31641.1
2-pyrone-4,6-dicarboxylate lactonase.
 
  
 0.939
SFS31671.1
4-oxalomesaconate tautomerase.
 
  
 0.899
SFS92985.1
P-hydroxybenzoate 3-monooxygenase.
 
  
  0.891
SFS79530.1
Alpha/beta hydrolase family protein.
 
  
  0.868
SFS79544.1
Muconolactone D-isomerase; Belongs to the muconolactone Delta-isomerase family.
 
   
 0.840
SFS78588.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
     
 0.821
SFS78601.1
Protocatechuate 3,4-dioxygenase, beta subunit.
     
 0.821
SFS31660.1
4-oxalomesaconate hydratase.
 
  
 0.797
SFT08165.1
Hypothetical protein.
 
  
 0.786
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.