STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS80050.1Sirohydrochlorin ferrochelatase. (232 aa)    
Predicted Functional Partners:
SFS34918.1
uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase.
 
 0.987
SFS80054.1
uroporphyrinogen-III synthase.
 
 
 0.959
SFS80069.1
Nitrite reductase (NADH) small subunit.
 
    0.908
SFS80079.1
Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
 0.889
SFS80116.1
MFS transporter, NNP family, nitrate/nitrite transporter.
 
    0.888
SFS35071.1
Cobalt-precorrin 5A hydrolase / precorrin-3B C17-methyltransferase.
 
  
 0.879
SFS35085.1
precorrin-6Y C5,15-methyltransferase (decarboxylating).
 
  
 0.877
SFS45744.1
Uroporphyrinogen III methyltransferase / synthase.
  
 
 0.876
SFS80102.1
Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.862
SFS80089.1
Assimilatory nitrate reductase (NADH) beta subunit.
 
  
 0.826
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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