STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS85882.1Amino acid ABC transporter ATP-binding protein, PAAT family (TC 3.A.1.3.-). (250 aa)    
Predicted Functional Partners:
SFS85868.1
Amino acid ABC transporter membrane protein, PAAT family (TC 3.A.1.3.-).
 0.999
SFS67508.1
Glutamate transport system permease protein.
 
 0.992
SFS67514.1
Glutamate transport system permease protein.
 0.992
SFS66592.1
Amino acid ABC transporter membrane protein 1, PAAT family (TC 3.A.1.3.-).
 0.987
SFS66577.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.972
SFS85858.1
Polar amino acid transport system substrate-binding protein.
 
 0.970
SFS67502.1
Glutamate transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.957
SFS92269.1
Cyclohexadienyl dehydratase; Belongs to the bacterial solute-binding protein 3 family.
 
 0.903
SFS92383.1
Hypothetical protein.
  
 0.855
SFS79294.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     
0.834
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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