STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS89349.1Predicted dehydrogenase. (361 aa)    
Predicted Functional Partners:
SFS71542.1
2-keto-myo-inositol dehydratase.
 
 
 0.889
SFS89392.1
Sugar phosphate isomerase/epimerase.
 
 
 0.845
SFS73103.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.839
SFS73117.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.834
SFS89374.1
Predicted dehydrogenase.
 
  
 
0.812
SFS74269.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
  
 0.776
SFS67351.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.772
SFS74253.1
5-deoxyglucuronate isomerase.
 
  
 0.767
SFS89384.1
Sugar phosphate isomerase/epimerase.
 
 
 0.753
SFS82606.1
Predicted dehydrogenase.
  
  
 
0.714
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.