STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS94331.1Transcriptional regulator, IclR family. (265 aa)    
Predicted Functional Partners:
SFS94362.1
2-methylcitrate dehydratase PrpD.
 
     0.799
SFS67238.1
Urea carboxylase.
  
 
  0.785
SFS94346.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
    
  0.779
SFS94354.1
Kynurenine formamidase.
  
    0.776
SFT00049.1
Transcriptional regulator, IclR family.
  
     0.774
SFS94339.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
       0.773
SFS41501.1
Transcriptional regulator, IclR family.
  
     0.763
SFS37144.1
Transcriptional regulator, IclR family.
  
     0.762
SFS65935.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.619
SFS94316.1
Allantoinase.
       0.498
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.