Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS95454.1 | SFS95461.1 | SAMN05660874_04474 | SAMN05660874_04475 | Hypothetical protein. | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | 0.949 |
SFS95454.1 | SFS95467.1 | SAMN05660874_04474 | SAMN05660874_04476 | Hypothetical protein. | Hypothetical protein. | 0.559 |
SFS95454.1 | SFS95473.1 | SAMN05660874_04474 | SAMN05660874_04477 | Hypothetical protein. | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | 0.740 |
SFS95454.1 | SFS95486.1 | SAMN05660874_04474 | SAMN05660874_04479 | Hypothetical protein. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.716 |
SFS95454.1 | nadK | SAMN05660874_04474 | SAMN05660874_04478 | Hypothetical protein. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.854 |
SFS95461.1 | SFS95454.1 | SAMN05660874_04475 | SAMN05660874_04474 | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | Hypothetical protein. | 0.949 |
SFS95461.1 | SFS95467.1 | SAMN05660874_04475 | SAMN05660874_04476 | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | Hypothetical protein. | 0.559 |
SFS95461.1 | SFS95473.1 | SAMN05660874_04475 | SAMN05660874_04477 | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | 0.742 |
SFS95461.1 | SFS95486.1 | SAMN05660874_04475 | SAMN05660874_04479 | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.716 |
SFS95461.1 | nadK | SAMN05660874_04475 | SAMN05660874_04478 | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.838 |
SFS95467.1 | SFS95454.1 | SAMN05660874_04476 | SAMN05660874_04474 | Hypothetical protein. | Hypothetical protein. | 0.559 |
SFS95467.1 | SFS95461.1 | SAMN05660874_04476 | SAMN05660874_04475 | Hypothetical protein. | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | 0.559 |
SFS95467.1 | SFS95473.1 | SAMN05660874_04476 | SAMN05660874_04477 | Hypothetical protein. | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | 0.812 |
SFS95467.1 | SFS95486.1 | SAMN05660874_04476 | SAMN05660874_04479 | Hypothetical protein. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.558 |
SFS95467.1 | nadK | SAMN05660874_04476 | SAMN05660874_04478 | Hypothetical protein. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.808 |
SFS95473.1 | SFS95454.1 | SAMN05660874_04477 | SAMN05660874_04474 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | Hypothetical protein. | 0.740 |
SFS95473.1 | SFS95461.1 | SAMN05660874_04477 | SAMN05660874_04475 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | Haloacid Dehalogenase Superfamily Class (subfamily) IIA. | 0.742 |
SFS95473.1 | SFS95467.1 | SAMN05660874_04477 | SAMN05660874_04476 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | Hypothetical protein. | 0.812 |
SFS95473.1 | SFS95486.1 | SAMN05660874_04477 | SAMN05660874_04479 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.756 |
SFS95473.1 | nadK | SAMN05660874_04477 | SAMN05660874_04478 | 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase. | NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.970 |
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