Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS96634.1 | SFS97870.1 | SAMN05660874_04607 | SAMN05660874_04721 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Na+/melibiose symporter. | 0.612 |
SFS97870.1 | SFS96634.1 | SAMN05660874_04721 | SAMN05660874_04607 | Na+/melibiose symporter. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.612 |
SFS97870.1 | SFS97875.1 | SAMN05660874_04721 | SAMN05660874_04722 | Na+/melibiose symporter. | Transcriptional regulator, TetR family. | 0.632 |
SFS97870.1 | SFS97894.1 | SAMN05660874_04721 | SAMN05660874_04724 | Na+/melibiose symporter. | 4-hydroxyphenylpyruvate dioxygenase. | 0.565 |
SFS97870.1 | aroE | SAMN05660874_04721 | SAMN05660874_04723 | Na+/melibiose symporter. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.554 |
SFS97875.1 | SFS97870.1 | SAMN05660874_04722 | SAMN05660874_04721 | Transcriptional regulator, TetR family. | Na+/melibiose symporter. | 0.632 |
SFS97875.1 | SFS97894.1 | SAMN05660874_04722 | SAMN05660874_04724 | Transcriptional regulator, TetR family. | 4-hydroxyphenylpyruvate dioxygenase. | 0.895 |
SFS97875.1 | aroE | SAMN05660874_04722 | SAMN05660874_04723 | Transcriptional regulator, TetR family. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.864 |
SFS97894.1 | SFS97870.1 | SAMN05660874_04724 | SAMN05660874_04721 | 4-hydroxyphenylpyruvate dioxygenase. | Na+/melibiose symporter. | 0.565 |
SFS97894.1 | SFS97875.1 | SAMN05660874_04724 | SAMN05660874_04722 | 4-hydroxyphenylpyruvate dioxygenase. | Transcriptional regulator, TetR family. | 0.895 |
SFS97894.1 | aroE | SAMN05660874_04724 | SAMN05660874_04723 | 4-hydroxyphenylpyruvate dioxygenase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.984 |
aroE | SFS97870.1 | SAMN05660874_04723 | SAMN05660874_04721 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Na+/melibiose symporter. | 0.554 |
aroE | SFS97875.1 | SAMN05660874_04723 | SAMN05660874_04722 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Transcriptional regulator, TetR family. | 0.864 |
aroE | SFS97894.1 | SAMN05660874_04723 | SAMN05660874_04724 | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 4-hydroxyphenylpyruvate dioxygenase. | 0.984 |