STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFS97912.13-hydroxyisobutyrate dehydrogenase. (287 aa)    
Predicted Functional Partners:
SFS65935.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.766
SFS93580.1
3-hydroxyisobutyrate dehydrogenase; Belongs to the HIBADH-related family.
  
  
 
0.718
SFS73663.1
Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family.
  
 
 0.715
SFS73635.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.710
SFS39433.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
  
 
 0.701
SFS43217.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.700
SFS93603.1
Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase.
 
 
  0.696
SFT05598.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.696
SFS72854.1
propionyl-CoA carboxylase alpha chain.
  
 
  0.647
SFT05085.1
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein.
  
 
  0.647
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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