Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFS42292.1 | SFT01942.1 | SAMN05660874_01000 | SAMN05660874_05020 | Nucleotide-binding universal stress protein, UspA family. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.650 |
SFS42292.1 | SFT01969.1 | SAMN05660874_01000 | SAMN05660874_05024 | Nucleotide-binding universal stress protein, UspA family. | Hypothetical protein. | 0.587 |
SFS69744.1 | SFT01942.1 | SAMN05660874_02732 | SAMN05660874_05020 | Uncharacterized protein, contains von Willebrand factor type A (vWA) domain. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.664 |
SFT01907.1 | SFT01915.1 | SAMN05660874_05015 | SAMN05660874_05016 | Squalene synthase HpnC. | Farnesyl-diphosphate farnesyltransferase. | 0.913 |
SFT01907.1 | SFT01921.1 | SAMN05660874_05015 | SAMN05660874_05017 | Squalene synthase HpnC. | Squalene-associated FAD-dependent desaturase. | 0.965 |
SFT01907.1 | SFT01927.1 | SAMN05660874_05015 | SAMN05660874_05018 | Squalene synthase HpnC. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.926 |
SFT01907.1 | SFT01934.1 | SAMN05660874_05015 | SAMN05660874_05019 | Squalene synthase HpnC. | Squalene-hopene/tetraprenyl-beta-curcumene cyclase. | 0.971 |
SFT01907.1 | SFT01942.1 | SAMN05660874_05015 | SAMN05660874_05020 | Squalene synthase HpnC. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.894 |
SFT01907.1 | SFT01949.1 | SAMN05660874_05015 | SAMN05660874_05021 | Squalene synthase HpnC. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.926 |
SFT01915.1 | SFT01907.1 | SAMN05660874_05016 | SAMN05660874_05015 | Farnesyl-diphosphate farnesyltransferase. | Squalene synthase HpnC. | 0.913 |
SFT01915.1 | SFT01921.1 | SAMN05660874_05016 | SAMN05660874_05017 | Farnesyl-diphosphate farnesyltransferase. | Squalene-associated FAD-dependent desaturase. | 0.979 |
SFT01915.1 | SFT01927.1 | SAMN05660874_05016 | SAMN05660874_05018 | Farnesyl-diphosphate farnesyltransferase. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.973 |
SFT01915.1 | SFT01934.1 | SAMN05660874_05016 | SAMN05660874_05019 | Farnesyl-diphosphate farnesyltransferase. | Squalene-hopene/tetraprenyl-beta-curcumene cyclase. | 0.969 |
SFT01915.1 | SFT01942.1 | SAMN05660874_05016 | SAMN05660874_05020 | Farnesyl-diphosphate farnesyltransferase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.898 |
SFT01915.1 | SFT01949.1 | SAMN05660874_05016 | SAMN05660874_05021 | Farnesyl-diphosphate farnesyltransferase. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.919 |
SFT01921.1 | SFT01907.1 | SAMN05660874_05017 | SAMN05660874_05015 | Squalene-associated FAD-dependent desaturase. | Squalene synthase HpnC. | 0.965 |
SFT01921.1 | SFT01915.1 | SAMN05660874_05017 | SAMN05660874_05016 | Squalene-associated FAD-dependent desaturase. | Farnesyl-diphosphate farnesyltransferase. | 0.979 |
SFT01921.1 | SFT01927.1 | SAMN05660874_05017 | SAMN05660874_05018 | Squalene-associated FAD-dependent desaturase. | Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family. | 0.855 |
SFT01921.1 | SFT01934.1 | SAMN05660874_05017 | SAMN05660874_05019 | Squalene-associated FAD-dependent desaturase. | Squalene-hopene/tetraprenyl-beta-curcumene cyclase. | 0.951 |
SFT01921.1 | SFT01942.1 | SAMN05660874_05017 | SAMN05660874_05020 | Squalene-associated FAD-dependent desaturase. | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase. | 0.946 |
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