STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT03161.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
SFT03150.1
Transcriptional regulator, PadR family.
 
     0.866
SFS33594.1
Hypothetical protein.
  
     0.645
SFS78425.1
Hypothetical protein.
  
     0.637
SFT03146.1
Nitroreductase.
       0.504
SFS53503.1
Glycosyl hydrolases family 18.
  
     0.496
SFS53970.1
DNA-binding transcriptional regulator, PadR family.
 
     0.489
SFT03173.1
Kynureninase.
       0.473
SFT03122.1
Mannosyltransferase (PIG-V).
       0.469
SFS73778.1
GlcNAc-PI de-N-acetylase.
  
     0.468
SFS72775.1
Chitinase.
  
     0.452
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.