STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT03781.1Arabinosyltransferase C. (1062 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
   0.891
SFS33583.1
Galactan 5-O-arabinofuranosyltransferase.
 
  
 0.837
SFT03721.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
 
     0.768
SFT03876.1
Alpha-1,2-mannosyltransferase.
  
 
   0.730
SFT03808.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
 
     0.721
SFT09019.1
Hypothetical protein.
  
     0.670
SFT03939.1
Septum formation.
  
    0.664
SFS36310.1
Hypothetical protein.
  
     0.655
SFS43845.1
Type VII secretion protein EccB.
  
     0.642
SFS38148.1
Mannosyl-oligosaccharide alpha-1,2-mannosidase.
    
   0.618
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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