STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT05126.1DNA-binding transcriptional regulator, FadR family. (212 aa)    
Predicted Functional Partners:
SFS78529.1
Transcriptional regulator, GntR family.
  
     0.753
SFS31527.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.678
SFS36667.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.659
SFS96699.1
DNA-binding transcriptional regulator, GntR family.
  
  
 0.655
SFS31889.1
Transcriptional regulator, GntR family.
  
  
 0.643
SFT08029.1
Transcriptional regulator, GntR family.
  
  
 0.620
SFS80444.1
Transcriptional regulator, GntR family.
  
  
 0.594
SFT05111.1
Hypothetical protein.
  
    0.590
SFT05096.1
Hypothetical protein.
       0.584
SFT05101.1
Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family.
       0.584
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.