STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT05279.1Cyclic nucleotide-binding domain-containing protein. (459 aa)    
Predicted Functional Partners:
SFS77830.1
Signal transduction histidine kinase.
 
 
 0.897
SFT05272.1
Geranylgeranyl diphosphate synthase, type I; Belongs to the FPP/GGPP synthase family.
 
   
 0.892
SFS55725.1
Z1 domain-containing protein.
    
 0.887
SFS33070.1
Glutamate synthase (NADH) large subunit.
    
 0.885
SFT05429.1
Glutamate synthase (NADH) large subunit.
    
 0.885
SFS90387.1
Acyl transferase domain-containing protein.
 
 0.851
SFS40957.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.838
SFT01187.1
Germacradienol/geosmin synthase.
  
  
  0.801
SFS74657.1
Tetratricopeptide repeat-containing protein.
    
 
 0.789
SFS90607.1
Acyl transferase domain-containing protein.
 
 
 0.788
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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