STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT08305.1Helix-turn-helix domain-containing protein. (285 aa)    
Predicted Functional Partners:
SFT08297.1
Protein of unknown function.
 
     0.851
SFS53332.1
Protein of unknown function.
  
     0.765
SFS71206.1
Protein of unknown function.
  
     0.762
SFS41841.1
Protein of unknown function.
  
     0.758
SFS92701.1
S-adenosyl methyltransferase.
 
     0.755
SFS99426.1
S-adenosyl methyltransferase.
  
     0.755
SFS30794.1
S-adenosyl methyltransferase.
  
     0.752
SFS37264.1
Protein of unknown function.
  
     0.751
SFS71231.1
S-adenosyl methyltransferase.
  
     0.748
SFS55687.1
Protein of unknown function.
  
     0.745
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.