STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT08381.1Catechol 2,3-dioxygenase. (131 aa)    
Predicted Functional Partners:
SFT08361.1
Arsenate reductase.
  
  
 0.783
SFS65935.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.759
SFS32397.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
    
 0.688
SFS32408.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
    
 0.688
SFT08353.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.685
SFT08368.1
ArsR family transcriptional regulator.
 
  
 0.671
SFT05598.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.651
SFS54759.1
Threonine dehydratase.
   
 
  0.607
nuoI
NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
 
 0.562
SFS90594.1
Cysteine synthase A.
  
 
  0.560
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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