STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFT09780.1Adenosylhomocysteinase. (405 aa)    
Predicted Functional Partners:
SFT01028.1
S-adenosyl-L-homocysteine hydrolase.
 
     0.976
SFT05662.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
 0.922
metE
Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
  
 
 0.894
SFS54792.1
Cystathionine beta-synthase.
  
 0.877
SFS46782.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.852
SFS96280.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
  
 
 0.852
SFS37003.1
Cystathionine gamma-lyase.
  
 0.758
SFS54776.1
Cystathionine gamma-lyase.
  
 0.758
SFS45470.1
Cysteine synthase A.
  
 0.746
SFT04599.1
O-acetylhomoserine sulfhydrylase.
     
 0.723
Your Current Organism:
Saccharopolyspora flava
NCBI taxonomy Id: 95161
Other names: DSM 44771, IFO 16345, JCM 10665, NBRC 16345, S. flava, Saccharopolyspora flava Lu et al. 2001, strain 07
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