STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDU99700.1Uncharacterized conserved protein. (487 aa)    
Predicted Functional Partners:
SDU99709.1
Uncharacterized conserved protein.
 
    
0.742
SDV05544.1
Phosphoserine phosphatase.
  
     0.712
SDV05549.1
Arylsulfatase.
 
     0.678
SDV04899.1
Arylsulfatase.
 
     0.677
SDV15469.1
Arylsulfatase.
 
     0.676
SDU99554.1
Arylsulfatase.
 
     0.675
SDV08341.1
Arylsulfatase.
 
     0.671
SDV06786.1
Hypothetical protein.
 
     0.532
SDV08324.1
Alkyl sulfatase BDS1, metallo-beta-lactamase superfamily.
 
     0.436
SDU99683.1
Uncharacterized protein.
       0.428
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.