STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA-2Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (371 aa)    
Predicted Functional Partners:
SDV00089.1
Spermidine/putrescine transport system permease protein.
 
  0.951
SDV00078.1
Spermidine/putrescine transport system permease protein.
 
 
  0.941
SDV00097.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.896
SDU86018.1
Spermidine/putrescine transport system permease protein.
 
 
  0.876
SDV00572.1
Spermidine/putrescine transport system permease protein.
  
  0.875
SDU86025.1
Spermidine/putrescine transport system permease protein.
  
  0.873
SDV08186.1
Spermidine/putrescine transport system permease protein.
 
 
  0.868
SDV08192.1
Spermidine/putrescine transport system permease protein.
  
  0.864
SDV00564.1
Spermidine/putrescine transport system permease protein.
 
 
  0.856
SDV13991.1
Putative spermidine/putrescine transport system permease protein.
 
  0.854
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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