STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkBDNA-N1-methyladenine dioxygenase. (226 aa)    
Predicted Functional Partners:
SDV02715.1
Hypothetical protein.
 
     0.879
SDV02699.1
DNA-O6-methylguanine--protein-cysteine S-methyltransferase /Transcriptional regulator Ada.
 
  
 0.857
SDV12035.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.676
SDV13657.1
Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
   
    0.676
SDV02723.1
Hypothetical protein.
       0.582
SDV06028.1
DNA-O6-methylguanine--protein-cysteine S-methyltransferase /Transcriptional regulator Ada; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family.
  
  
 0.574
SDV13589.1
DNA-3-methyladenine glycosylase II.
  
  
 0.539
SDV02732.1
Protein of unknown function.
       0.538
SDV06035.1
DNA-3-methyladenine glycosylase II.
     
 0.437
SDV06641.1
rubredoxin-NAD+ reductase; Belongs to the FAD-dependent oxidoreductase family.
     
 0.419
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.