STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV06345.1Vanillate O-demethylase ferredoxin subunit. (316 aa)    
Predicted Functional Partners:
nuoC
NADH dehydrogenase subunit C /NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.999
SDV14292.1
Sulfite reductase (NADPH) flavoprotein alpha-component.
   
 0.951
SDV09828.1
Cytochrome P450.
 0.949
SDV10291.1
Cytochrome P450.
 0.948
SDV07558.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component.
   
 0.946
SDV10177.1
Cytochrome P450.
 0.925
SDV06886.1
BFD-like [2Fe-2S] binding domain-containing protein.
 
 0.903
SDV06356.1
3-phenylpropionate/cinnamic acid dioxygenase, small subunit.
 
 
 0.898
SDV00760.1
Sulfite reductase (NADPH) hemoprotein beta-component.
   
 0.895
SDV14656.1
precorrin-3B synthase.
   
 0.895
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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