STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV07882.1Putrescine transport system permease protein. (304 aa)    
Predicted Functional Partners:
SDV07888.1
Putrescine transport system permease protein.
 
 0.981
potA-6
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.976
SDV02380.1
Polyamine ABC transporter substrate-binding protein; Putative spermidine/putrescine transport system substrate-binding protein/putrescine transport system substrate-binding protein.
 
 
  0.912
SDV03273.1
Putrescine transport system substrate-binding protein.
  
 
  0.911
potA-8
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.899
SDV16248.1
Putrescine transport system permease protein.
 
 0.895
SDV00078.1
Spermidine/putrescine transport system permease protein.
 
 0.891
SDV00554.1
Spermidine/putrescine transport system substrate-binding protein.
 
 
  0.888
SDU93538.1
Putrescine transport system substrate-binding protein.
 
 
  0.887
SDV05088.1
Polyamine ABC transporter substrate-binding protein; Putative spermidine/putrescine transport system substrate-binding protein/putrescine transport system substrate-binding protein.
 
 
  0.887
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.