STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV11263.1Na+/proline symporter. (1156 aa)    
Predicted Functional Partners:
SDU90400.1
Multi-sensor hybrid histidine kinase.
 
0.999
SDU93375.1
Two-component system, NarL family, sensor histidine kinase EvgS.
  
0.999
SDU99813.1
Multi-sensor hybrid histidine kinase.
  
0.999
SDV00597.1
Hypothetical protein.
  
0.999
SDV00604.1
Hypothetical protein.
  
 0.999
SDV01052.1
PAS/PAC sensor hybrid histidine kinase.
  
0.999
SDV03709.1
Signal transduction histidine kinase.
  
0.999
SDV03732.1
Signal transduction histidine kinase.
  
0.999
SDV03921.1
Hypothetical protein.
  
 0.999
SDV05018.1
Signal transduction histidine kinase.
  
0.999
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.