Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDV07316.1 | SDV13338.1 | SAMN05216558_2697 | SAMN05216558_3868 | Protein of unknown function. | Low-affinity inorganic phosphate transporter. | 0.566 |
SDV13336.1 | SDV13338.1 | SAMN05216558_3867 | SAMN05216558_3868 | Hypothetical protein. | Low-affinity inorganic phosphate transporter. | 0.436 |
SDV13338.1 | SDV07316.1 | SAMN05216558_3868 | SAMN05216558_2697 | Low-affinity inorganic phosphate transporter. | Protein of unknown function. | 0.566 |
SDV13338.1 | SDV13336.1 | SAMN05216558_3868 | SAMN05216558_3867 | Low-affinity inorganic phosphate transporter. | Hypothetical protein. | 0.436 |
SDV13338.1 | SDV14706.1 | SAMN05216558_3868 | SAMN05216558_4576 | Low-affinity inorganic phosphate transporter. | Hypothetical chaperone protein. | 0.501 |
SDV13338.1 | SDV15048.1 | SAMN05216558_3868 | SAMN05216558_4751 | Low-affinity inorganic phosphate transporter. | Glutamate synthase (NADPH) large subunit. | 0.458 |
SDV13338.1 | cobA-2 | SAMN05216558_3868 | SAMN05216558_3022 | Low-affinity inorganic phosphate transporter. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.742 |
SDV13338.1 | flgG | SAMN05216558_3868 | SAMN05216558_3643 | Low-affinity inorganic phosphate transporter. | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | 0.638 |
SDV13338.1 | lysS | SAMN05216558_3868 | SAMN05216558_0300 | Low-affinity inorganic phosphate transporter. | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.495 |
SDV13338.1 | pstA | SAMN05216558_3868 | SAMN05216558_5211 | Low-affinity inorganic phosphate transporter. | Phosphate transport system permease protein. | 0.528 |
SDV13338.1 | pyrH | SAMN05216558_3868 | SAMN05216558_0344 | Low-affinity inorganic phosphate transporter. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.510 |
SDV14706.1 | SDV13338.1 | SAMN05216558_4576 | SAMN05216558_3868 | Hypothetical chaperone protein. | Low-affinity inorganic phosphate transporter. | 0.501 |
SDV14706.1 | SDV15048.1 | SAMN05216558_4576 | SAMN05216558_4751 | Hypothetical chaperone protein. | Glutamate synthase (NADPH) large subunit. | 0.457 |
SDV15048.1 | SDV13338.1 | SAMN05216558_4751 | SAMN05216558_3868 | Glutamate synthase (NADPH) large subunit. | Low-affinity inorganic phosphate transporter. | 0.458 |
SDV15048.1 | SDV14706.1 | SAMN05216558_4751 | SAMN05216558_4576 | Glutamate synthase (NADPH) large subunit. | Hypothetical chaperone protein. | 0.457 |
SDV15048.1 | cobA-2 | SAMN05216558_4751 | SAMN05216558_3022 | Glutamate synthase (NADPH) large subunit. | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.533 |
cobA-2 | SDV13338.1 | SAMN05216558_3022 | SAMN05216558_3868 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Low-affinity inorganic phosphate transporter. | 0.742 |
cobA-2 | SDV15048.1 | SAMN05216558_3022 | SAMN05216558_4751 | uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Glutamate synthase (NADPH) large subunit. | 0.533 |
flgG | SDV13338.1 | SAMN05216558_3643 | SAMN05216558_3868 | Flagellar basal-body rod protein FlgG; Belongs to the flagella basal body rod proteins family. | Low-affinity inorganic phosphate transporter. | 0.638 |
lysS | SDV13338.1 | SAMN05216558_0300 | SAMN05216558_3868 | lysyl-tRNA synthetase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family. | Low-affinity inorganic phosphate transporter. | 0.495 |
page 1 of 2