STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDV14729.1Hypothetical protein. (689 aa)    
Predicted Functional Partners:
SDV14711.1
psiF repeat-containing protein.
  
    0.618
SDV07912.1
Uncharacterized conserved protein YbaA, DUF1428 family.
   
    0.614
SDV15575.1
Hypothetical protein.
   
    0.564
SDV07703.1
Protein of unknown function.
  
     0.539
SDV06762.1
Protein of unknown function.
  
     0.523
SDV04243.1
Protein of unknown function.
  
     0.521
SDV16918.1
Hypothetical protein.
  
     0.504
SDV06978.1
Threonine/homoserine efflux transporter RhtA.
  
     0.490
amn
AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.
  
    0.463
SDV03166.1
DUF883 family protein; Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family.
  
 
   0.429
Your Current Organism:
Pseudomonas vancouverensis
NCBI taxonomy Id: 95300
Other names: ATCC 700688, CCUG 49675, CIP 106707, P. vancouverensis, strain DhA-51
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.