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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS54VPS54 subunit of GARP complex. (977 aa)    
Predicted Functional Partners:
VPS52
VPS52 subunit of GARP complex.
    
 0.998
VPS53
VPS53 subunit of GARP complex.
   
 0.997
VPS51
VPS51 subunit of GARP complex.
   
 0.986
EIPR1
EARP complex and GARP complex interacting protein 1.
    
 0.914
STX16
Syntaxin 16; Belongs to the syntaxin family.
    
 0.889
VPS50
VPS50 subunit of EARP/GARPII complex.
   
 
 0.878
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.846
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.846
COG3
Component of oligomeric golgi complex 3.
     
 0.845
COG2
Component of oligomeric golgi complex 2.
     
 0.827
Your Current Organism:
Cercocebus atys
NCBI taxonomy Id: 9531
Other names: C. atys, Cercocebus torquatus atys, sooty mangabey
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